Questions and Answers : Unix/Linux : No new tasks for weeks, no Virtualbox
Author | Message |
---|---|
gw666 Send message Joined: 30 Apr 20 Posts: 2 Credit: 387,116,939 RAC: 0 |
I've been using rosetta@home for backfilling on a HPC system since last year, but I haven't gotten new tasks for a while. I always see the messages about missing virtualbox, but I cannot install this on the machines. I could run a container image with the rosetta workload if such a thing would be provided somehow. |
Falconet Send message Joined: 9 Mar 09 Posts: 353 Credit: 1,227,479 RAC: 917 |
Best thing to do is probably to choose another project and keep Rosetta as well since every now and then they have some non-Virtualbox work. |
nwayno Send message Joined: 28 May 20 Posts: 6 Credit: 7,006,260 RAC: 7 |
I haven't had work units in months. My guess is that they have shut down the project, and never bothered to tell anyone. This seems to be evidenced by the fact that they are running Ubuntu 16.04 on their servers which hit end-of-life in April of 2021. I have switched back to Einstein at Home at World Community Grid. I have shutdown all my PI 4's since they don't have either work units that will work on a PI 4. Wayno |
Bill Swisher Send message Joined: 10 Jun 13 Posts: 36 Credit: 33,198,055 RAC: 32,750 |
I installed VB the other day. Downloaded some work (2GB file), they failed for some reason. I uninstalled VB. If they've got work, I'll run it, but not installing VB just for it. |
Grant (SSSF) Send message Joined: 28 Mar 20 Posts: 1684 Credit: 17,933,837 RAC: 22,604 |
I installed VB the other day. Downloaded some work (2GB file), they failed for some reason. I uninstalled VB. If they've got work, I'll run it, but not installing VB just for it.Python Tasks require 7.5GB of disk space per Task for the VM image, and a minimum of 3GB of RAM (although they actually use much less). The actual Task data file size s similar to Rosetta 4.20 Tasks- several hundred kB. Grant Darwin NT |
Bill Swisher Send message Joined: 10 Jun 13 Posts: 36 Credit: 33,198,055 RAC: 32,750 |
I currently have, free, 900GB of drive space and 25GB of memory. |
Grant (SSSF) Send message Joined: 28 Mar 20 Posts: 1684 Credit: 17,933,837 RAC: 22,604 |
I currently have, free, 900GB of drive space and 25GB of memory.It doesn't matter what you have, what matters is how much BOINC is able to use- and that is set by you in your Computing preferences, DIsk settings. And regardless of how large you might set the "Use no more that" value, if the "Leave at least" or "Use no more than xx%" value is smaller, then that is the value that is used (same with the memory- you have to make it available to BOINC to use under the "Memory" settings). Grant Darwin NT |
Bill Swisher Send message Joined: 10 Jun 13 Posts: 36 Credit: 33,198,055 RAC: 32,750 |
Sorry I didn't get back to you, been out of town. Disk: Leave at least .1GB free. Use no more than 90% of total. Memory: 90% for both and 75% for page/swap. free -h total used free shared buff/cache available Mem: 30Gi 14Gi 11Gi 23Mi 4.3Gi 15Gi Swap: 2.0Gi 0B 2.0Gi And it currently has 14 cores running Rosetta, slightly throttled to keep the heat down since it's not liquid cooled, something it hasn't done in months. And yes it's still whining because virtualbox isn't installed. The other computer has all 24 cores running something other than Rosetta and Rosetta is also whining about virtualbox not being installed. |
It's My Island [SFmWnT6y1ghzTn1hFpD69exBiz5bFtRiam] Send message Joined: 22 Sep 12 Posts: 10 Credit: 88,574,821 RAC: 0 |
I've looked around off and on for this a bit. Want to make sure that requiring VirtualBox for tasks is the expected behavior. There are a few threads on this matter e.g. https://boinc.bakerlab.org/rosetta/forum_thread.php?id=14814#103235. If there is no way around this, could someone please provide directions for the 'thinnest' way to add VirtualBox on Linux? Is there a way to provide VirtualBox it without maintaining another OS instance? |
It's My Island [SFmWnT6y1ghzTn1hFpD69exBiz5bFtRiam] Send message Joined: 22 Sep 12 Posts: 10 Credit: 88,574,821 RAC: 0 |
Fixed one host with the setting here https://boinc.bakerlab.org/rosetta/hosts_user.php. Didn't know there was an allow virtualbox option on the host detail page. |
Tom M Send message Joined: 20 Jun 17 Posts: 87 Credit: 15,285,496 RAC: 40,852 |
I've looked around off and on for this a bit. Want to make sure that requiring VirtualBox for tasks is the expected behavior. There are a few threads on this matter e.g. https://boinc.bakerlab.org/rosetta/forum_thread.php?id=14814#103235. If there is no way around this, could someone please provide directions for the 'thinnest' way to add VirtualBox on Linux? Is there a way to provide VirtualBox it without maintaining another OS instance? https://www.virtualbox.org/wiki/Linux_Downloads The Ubuntu 19 version has installed on Ubuntu 20 and I am currently downloading Python tasks. Will follow up once it starts crunching. Tom M Help, my tagline is missing..... Help, my tagline is......... Help, m........ Hel..... |
Questions and Answers :
Unix/Linux :
No new tasks for weeks, no Virtualbox
©2024 University of Washington
https://www.bakerlab.org