Please post issues/bugs regarding the Rosetta 4.0+ application here.

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2 recent errors:

Application version Rosetta v4.03 windows_x86_64
BBGCBeNTF2_24_fold_SAVE_ALL_OUT_516172_1197_0

<core_client_version>7.8.2</core_client_version>
[...]
std::cerr: Exception was thrown:
chi angle must be between -180 and 180: nan

Application version Rosetta v4.04 windows_intelx86
rb_10_06_78089_120672__t000__0_C1_SAVE_ALL_OUT_IGNORE_THE_REST_520283_579_0

<core_client_version>7.8.2</core_client_version>
[...]
DummyMover::apply() should never have been called! (JobDistributor/Parser should have replaced DummyMover.)

ERROR: Function not implemented.
ERROR:: Exit from: ......srcappspublicboincminirosetta.cc line: 92
03:36:19 (932): called boinc_finish(0)

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A few more errors I didn't get a chance to report earlier, only one of which is still showing in my task list

Application version Rosetta v4.04 windows_x86_64
[url=https://boinc.bakerlab.org/result.php?resultid=946640972nme11_v4_cpp_11_D2_v3_SAVE_ALL_OUT_522647_862_0[/url]

std::cerr: Exception was thrown:
Cannot normalize xyzVector of length() zero

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On my Linux x64 - PC BOINC downloads rosetta_4.03_i686-pc-linux-gnu ?





I already got a rosetta_4.03_x86_64-pc-linux-gnu ?

getting error on v4.04 task that still validates:

https://boinc.bakerlab.org/result.php?resultid=948523506

error: cannot create ./minirosetta_database/scoring/qsar/shape_histogram_data.js
Permission denied

also on ver 3.78

https://boinc.bakerlab.org/result.php?resultid=948507283


https://boinc.bakerlab.org/result.php?resultid=948507315

fk

I'm still with PC Windows 3.78, not even 3.83 gets to me, let alone 4.00+, is this a beta version?

I'm still with PC Windows 3.78, not even 3.83 gets to me, let alone 4.00+, is this a beta version?

It's a very long beta. The first 4.x was released on Ralph on August...

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OK I'll wait then

I'm still with PC Windows 3.78, not even 3.83 gets to me, let alone 4.00+, is this a beta version?

And I think v3.83 is Android

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Some 4.06 here on Windows 10. Seems without problems.

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Right after I said I wasn't getting any 4.06 tasks I have started seeing a few. It is only a very small amount. Maybe less than 5% of the total. They do seem to be working fine though.

What I'm trying to figure out is why the Rosetta RAC has been dropping so much since about a month ago. These are mostly 3.78 tasks but it is way down from what it used to be.

See this post https://boinc.bakerlab.org/rosetta/forum_thread.php?id=12320

The 4.06 wus seem to be longer than 3.78
My default runtime is 2hs, but these wus run over 6hs...

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This post should be here. There are 2 more errors since first report


[quote]several Rosetta 4.06 units failing with this error:

<core_client_version>7.6.31</core_client_version>
<![CDATA[
<message>
process got signal 11
</message>
<stderr_txt>
command: ../../projects/boinc.bakerlab.org_rosetta/rosetta_4.06_x86_64-pc-linux-gnu @9res_cis_hydrophobic_nmethyl_c.103.1_1_0001.flags -nstruct 10000 -cpu_run_time 28800 -watchdog -boinc:max_nstruct 600 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2224394
Starting watchdog...
Watchdog active.
BOINC:: CPU time: 43533.6s, 14400s + 28800s[2017-12- 6 12:16:35:] :: BOINC
WARNING! cannot get file size for default.out.gz: could not open file.
Output exists: default.out.gz Size: -1
InternalDecoyCount: 0 (GZ)
-----
0
-----
Stream information inconsistent.
Writing W_0000001
======================================================
DONE :: 1 starting structures 43566.1 cpu seconds
This process generated 1 decoys from 1 attempts
======================================================
12:06:19 (72653): called boinc_finish(0)

</stderr_txt>
]]>

Errors continue. Linux machines seem more prone to fail than windows's or others.

I'm stopping crunching and will check later.

My target CPU run time is 1 hour.
Rosetta application runs for >5 hours. Then it fails. It happened 1 week ago too.
It looks no credit will get granted for that. I mean the credit granted after ~24 hours for errors.
How can I disable receiving Rosetta workunits? I want Rosetta Mini only.

<core_client_version>7.4.22</core_client_version>
<![CDATA[
<message>
process got signal 11
</message>
<stderr_txt>
command: ../../projects/boinc.bakerlab.org_rosetta/rosetta_4.06_x86_64-pc-linux-gnu @cp11v3n3_c.293.9_0001_0001_0001_0001.flags -nstruct 10000 -cpu_run_time 28800 -watchdog -boinc:max_nstruct 600 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 1894171
Starting watchdog...
Watchdog active.
BOINC:: CPU time: 18537.5s, 14400s + 3600s[2017-12-20 19:18:14:] :: BOINC 
WARNING! cannot get file size for default.out.gz: could not open file.
Output exists: default.out.gz Size: -1
InternalDecoyCount: 0 (GZ)
-----
0
-----
Stream information inconsistent.
Writing W_0000001
======================================================
DONE ::     1 starting structures  18537.5 cpu seconds
This process generated      1 decoys from       1 attempts
======================================================
19:18:14 (10793): called boinc_finish(0)

</stderr_txt>
]]>

Link to result: https://boinc.bakerlab.org/result.php?resultid=961026207

I already got a rosetta_4.03_x86_64-pc-linux-gnu ?

It seems that also on Windows, now, the 4.06 is a 64 bit image and not a wrapper.
Is it true??

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Hi

All Rosetta 4.06 = "process got signal 4" on macOS 10.13.2 + boinc 7.8.4

https://boinc.bakerlab.org/rosetta/results.php?hostid=1665975&offset=0&show_names=0&state=0&appid=2

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Rosetta 4.06 needs to die. So many just run and run until they abort themselves.

Boinc 7.8.3 recent Rosetta 4.06 errors

PF16908.4_aivan_SAVE_ALL_OUT_03_09_541716_98_0

std::cerr: Exception was thrown:
chi angle must be between -180 and 180: nan

PF02107.15_aivan_SAVE_ALL_OUT_03_09_541721_133_0

std::cerr: Exception was thrown:
chi angle must be between -180 and 180: nan

PF05100.11_aivan_SAVE_ALL_OUT_03_09_541721_107_0

std::cerr: Exception was thrown:
chi angle must be between -180 and 180: nan

PF15956.4_aivan_SAVE_ALL_OUT_03_09_541721_229_0

std::cerr: Exception was thrown:
chi angle must be between -180 and 180: nan

PF04854.13_aivan_SAVE_ALL_OUT_03_09_541030_945_1

std::cerr: Exception was thrown:
chi angle must be between -180 and 180: nan

PF07916.10_aivan_SAVE_ALL_OUT_03_09_541715_248_0

std::cerr: Exception was thrown:
chi angle must be between -180 and 180: nan

PF10076.8_aivan_SAVE_ALL_OUT_03_09_541721_427_0

std::cerr: Exception was thrown:
chi angle must be between -180 and 180: nan

PF12237.7_aivan_SAVE_ALL_OUT_03_09_541716_450_0

std::cerr: Exception was thrown:
chi angle must be between -180 and 180: nan

PF11151.7_aivan_SAVE_ALL_OUT_03_09_541716_366_0

std::cerr: Exception was thrown:
chi angle must be between -180 and 180: nan

PF12400.7_aivan_SAVE_ALL_OUT_03_09_541716_366_0

(unknown error) - exit code -1073741819 (0xc0000005)</message>
<...>
Unhandled Exception Detected...

- Unhandled Exception Record -
Reason: Access Violation (0xc0000005) at address 0x0000000000000000

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Version 4.06: Getting "computational error" after 1 second of trying on a Mac Pro, Boinc 7.6.33.

Mini 3.78 works fine.

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