Rosetta 4.03

Author	Message
[VENETO] boboviz Send message Joined: 1 Dec 05 Posts: 1994 Credit: 9,524,889 RAC: 7,500	Message 87267 - Posted: 12 Sep 2017, 8:26:44 UTC New rosetta app has arrived silently.... :-P ID: 87267 · Rating: 0 · rate: / Reply Quote

David E K Volunteer moderator Project administrator Project developer Project scientist Send message Joined: 1 Jul 05 Posts: 1018 Credit: 4,334,829 RAC: 0	Message 87270 - Posted: 12 Sep 2017, 18:17:17 UTC - in response to Message 87267. Yes, I'm running some tests before an official release. ID: 87270 · Rating: 0 · rate: / Reply Quote

[B@P] Daniel Send message Joined: 8 Jan 17 Posts: 1 Credit: 1,965,792 RAC: 0	Message 87276 - Posted: 12 Sep 2017, 22:20:17 UTC Please also update the Rosetta@home preferences page, now it does not allow to select apps to crunch. ID: 87276 · Rating: 0 · rate: / Reply Quote

David E K Volunteer moderator Project administrator Project developer Project scientist Send message Joined: 1 Jul 05 Posts: 1018 Credit: 4,334,829 RAC: 0	Message 87278 - Posted: 13 Sep 2017, 0:40:41 UTC - in response to Message 87276. I'll have to look into the possible consequences/negative impacts of enabling this feature. We'd prefer not to enable any bias though. ID: 87278 · Rating: 0 · rate: / Reply Quote

[VENETO] boboviz Send message Joined: 1 Dec 05 Posts: 1994 Credit: 9,524,889 RAC: 7,500	Message 87307 - Posted: 16 Sep 2017, 9:40:00 UTC - in response to Message 87270. Yes, I'm running some tests before an official release. It seems a very little test. No work here and no work on Ralph. ID: 87307 · Rating: 0 · rate: / Reply Quote

David E K Volunteer moderator Project administrator Project developer Project scientist Send message Joined: 1 Jul 05 Posts: 1018 Credit: 4,334,829 RAC: 0	Message 87330 - Posted: 20 Sep 2017, 18:44:27 UTC - in response to Message 87307. I just announced it to the lab so I'd expect some production jobs soon. ID: 87330 · Rating: 0 · rate: / Reply Quote

Chilean Send message Joined: 16 Oct 05 Posts: 711 Credit: 26,694,507 RAC: 0	Message 87335 - Posted: 21 Sep 2017, 13:53:11 UTC What's new in this version? ID: 87335 · Rating: 0 · rate: / Reply Quote

[VENETO] boboviz Send message Joined: 1 Dec 05 Posts: 1994 Credit: 9,524,889 RAC: 7,500	Message 87337 - Posted: 21 Sep 2017, 18:18:01 UTC - in response to Message 87335. Last modified: 21 Sep 2017, 18:18:24 UTC What's new in this version? From Ralph: A new rosetta_beta app has been added as version 4.00 for testing. This version represents a recent version of the Rosetta source distribution And from RosettaCommons https://www.rosettacommons.org/docs/latest/release-notes ID: 87337 · Rating: 0 · rate: / Reply Quote

[VENETO] boboviz Send message Joined: 1 Dec 05 Posts: 1994 Credit: 9,524,889 RAC: 7,500	Message 87383 - Posted: 26 Sep 2017, 9:06:26 UTC My firsts 4.03 wus are gone without problems. ID: 87383 · Rating: 0 · rate: / Reply Quote

Defender Send message Joined: 22 Mar 08 Posts: 10 Credit: 13,517,861 RAC: 909	Message 87393 - Posted: 27 Sep 2017, 16:16:15 UTC Will 4.03 replace 3.73 or will they coexist? ID: 87393 · Rating: 0 · rate: / Reply Quote

David E K Volunteer moderator Project administrator Project developer Project scientist Send message Joined: 1 Jul 05 Posts: 1018 Credit: 4,334,829 RAC: 0	Message 87395 - Posted: 27 Sep 2017, 18:35:38 UTC - in response to Message 87393. Eventually it will replace minirosetta. Our public structure prediction server, Robetta, and in house pipelines are not yet compatible with the new version. ID: 87395 · Rating: 0 · rate: / Reply Quote

Chilean Send message Joined: 16 Oct 05 Posts: 711 Credit: 26,694,507 RAC: 0	Message 87396 - Posted: 27 Sep 2017, 18:50:11 UTC Why is the minirosetta app "mini"? And why is the 4.03 version not "mini"? ID: 87396 · Rating: 0 · rate: / Reply Quote

David E K Volunteer moderator Project administrator Project developer Project scientist Send message Joined: 1 Jul 05 Posts: 1018 Credit: 4,334,829 RAC: 0	Message 87398 - Posted: 27 Sep 2017, 22:32:31 UTC - in response to Message 87396. It's historical. R@h first started with a "rosetta" app which was the early fortran to C++ port of the Rosetta software package. The fortran like C++ code base was then ported to a better organized, multi-library, object oriented C++ software package which current Rosetta is still based on. This package was called "minirosetta" to distinguish it from the old fortran like Rosetta package. The 4.03 version has a different name mainly because "rosetta_scripts" xml based protocols are not backwards compatible with minirosetta jobs, giving us a reason to go back to the actual "rosetta" name. So the naming went from rosetta to minirosetta and back to rosetta. ID: 87398 · Rating: 0 · rate: / Reply Quote

[VENETO] boboviz Send message Joined: 1 Dec 05 Posts: 1994 Credit: 9,524,889 RAC: 7,500	Message 87401 - Posted: 28 Sep 2017, 8:34:04 UTC - in response to Message 87395. Eventually it will replace minirosetta. Our public structure prediction server, Robetta, and in house pipelines are not yet compatible with the new version. Seems a lot of work to do. (always hoping for optimizations) ID: 87401 · Rating: 0 · rate: / Reply Quote